Choosing an AI Agent

FermiLink delegates reasoning to an external AI agent provider. The global setting of the default agent for FermiLink is done with fermilink agent <provider>.

Supported providers

Provider

CLI tool

Install

Notes

Codex

codex

npm i -g @openai/codex or brew install codex

OpenAI’s coding agent.

Claude

claude

See Claude CLI docs

Anthropic’s Claude Code.

Gemini

gemini

See Gemini CLI docs

Google’s Gemini CLI.

OpenCode

opencode

See OpenCode docs

Model-agnostic OpenCode CLI. Authenticate providers with opencode auth login and use model names in provider/model form.

Setting up your agent

# 1. Install the provider CLI (example: Codex)
npm i -g @openai/codex

# 2. Authenticate
codex login

# 3. Register with FermiLink
fermilink agent codex

# Switch providers later
fermilink agent claude
fermilink agent gemini
fermilink agent opencode --model openai/gpt-5.5

How to choose

All providers work with the main FermiLink workflows (exec, chat, loop, research, reproduce, and optimize). The exploop Windows workflow is documented separately and remains Codex-tested. The best provider choice depends on your priorities:

If you want the broadest compatibility: Codex and Claude are the most tested providers, which give the richest interactive experience.

If you want flexible model/provider routing: OpenCode lets FermiLink use any provider/model profile configured in OpenCode.

If you use Google Cloud: Gemini is a natural fit if you’re already in the Google ecosystem.

Note

We are actively adding support for more providers. If you have a preferred agent provider that you want to see integrated, please let us know in the GitHub discussions.

Advanced configuration

By default, agents run in a sandbox that restricts file-system and network access. Some scientific simulations (e.g., MPI jobs, access to external data) require bypassing the sandbox. You can do this per-provider:

# show current policy
fermilink agent --json

# enforce sandbox mode (default), codex provider
fermilink agent codex --sandbox --model gpt-5.3-codex --reasoning-effort xhigh

# bypass sandbox (which might be needed for local MPI jobs)
fermilink agent codex --bypass-sandbox --model gpt-5.3-codex --reasoning-effort xhigh

# bypass sandbox for claude
fermilink agent claude --bypass-sandbox --model sonnet --reasoning-effort high

# bypass sandbox for gemini
fermilink agent gemini --bypass-sandbox --model auto-gemini-3 --reasoning-effort high

# bypass sandbox for opencode
fermilink agent opencode --bypass-sandbox --model openai/gpt-5.5 --reasoning-effort xhigh

Warning

When fermilink agent --bypass-sandbox is needed for maximal functionality, NEVER run it as a root user.

By default, FermiLink normalizes the reasoning effort setting for agents to the codex provider’s reasoning effort levels (low, medium, high, xhigh). For OpenCode, use model identifiers in provider/model form; FermiLink maps xhigh reasoning effort to OpenCode’s max variant.